Functional Groups and Solvent Properties
Working reference for the substrate scope of organic chemistry (functional groups, acidity/basicity scales) and the solvent matrix it lives in. Two bundled Tier-3 catalogs:
Functional group taxonomy + acid/base pKa tables — what the molecule is and how protonation state shifts with pH.
Solvent properties table — bp, mp, dielectric, dipole, Hildebrand δ, log P, density, miscibility, toxicity for ~35 common solvents, with green-chemistry replacement guides.
All units SI primary (°C, kPa, mol/L). pKa in water at 25 °C unless noted. Solvent dielectric ε at 20–25 °C.
Part 1 — Functional Group Taxonomy
Hydrocarbons
Group Structure Reactivity profile Alkane (paraffin) C-H, C-C sp³ only Radical halogenation, combustion; otherwise inert Alkene (olefin) C=C sp² Electrophilic addition (HX, X₂, H₂O/H⁺, HgX₂/H₂O), hydroboration, ozonolysis, metathesis, hydrogenation, epoxidation, dihydroxylation, Heck/Stille/Suzuki couplings Alkyne C≡C sp All alkene rxns plus terminal acidity (pKa 25 → metalation with NaNH₂, RLi), Sonogashira, click (CuAAC), Glaser homocoupling Allene C=C=C cumulated Chirality (axial); 1,2- and 2,3-additions Diene 1,3 C=C-C=C conjugated Diels-Alder, 1,2- vs 1,4-addition (HCl: thermodynamic at low T → kinetic) Aromatic (arene) (4n+2) π e⁻ Electrophilic aromatic substitution (SEAr: nitration, halogenation, Friedel-Crafts acyl/alkyl, sulfonation, formylation), nucleophilic aromatic substitution (SNAr — needs EWG), benzyne, lithiation Heteroaromatic Pyridine, pyrrole, furan, thiophene, indole, imidazole, oxazole, thiazole, triazoles, tetrazoles, pyrimidine, purine, etc. Often more reactive than benzene; pyridine SNAr-prone at C2/4
Alcohols and ethers
Group Structure Reactivity Alcohol 1° RCH₂-OH Oxidation → aldehyde → carboxylic acid; substitution via tosylate/mesylate; ester formation Alcohol 2° R₂CH-OH Oxidation → ketone; SN1/E1 prone Alcohol 3° R₃C-OH E1/SN1 dominant; no easy oxidation (no α-H to C-OH) Phenol Ar-OH Acidic (pKa ~10), oxidation to quinone, electrophilic at ortho/para Ether R-O-R Inert; ether cleavage by HI/HBr; epoxides ring-open Epoxide (oxirane) C-C ring with O Strained, electrophilic at less-hindered C (acid) or more-hindered (base); SN2 ring-open Acetal / ketal R₂C(OR’)₂ Protecting group for ketone/aldehyde; acid-labile, base-stable Hemiacetal R₂C(OH)(OR’) Carbohydrate anomers; usually closed Orthoester RC(OR’)₃ Acid-labile aldehyde / ester equivalent Carbonate RO-CO-OR Diethyl, dimethyl carbonate as green alkylating agents
Carbonyls
Group Structure Reactivity Aldehyde RCHO Most reactive C=O; oxidation → COOH; nucleophilic addition (RM, hydride, RNH₂, water); aldol Ketone R-CO-R Less reactive than aldehyde (steric + electronic); nucleophilic addition; aldol; Wittig; Baeyer-Villiger to ester Carboxylic acid RCOOH pKa 4–5; activated for amide/ester formation via DCC/EDC/HATU/T3P or acid chloride/anhydride intermediate Carboxylate salt RCOO⁻ Nucleophile for alkylation (Finkelstein-like) Ester RCOOR’ Less reactive than acid chloride/anhydride; saponification; transesterification; Claisen/Dieckmann Lactone cyclic ester β/γ/δ; ring-strain affects opening Amide RCONR’R” Least reactive C=O; partial double-bond C-N (~16 kcal/mol rotation barrier); hydrolysis hard Lactam cyclic amide β-lactam (penicillin) strained → reactive Imide R-CO-NR’-CO-R Acidic NH (pKa ~10–12); Gabriel synthesis Acyl chloride RCOCl Most reactive C=O; SOCl₂, COCl₂, oxalyl chloride, (COCl)₂/cat DMF for synthesis Anhydride RCO-O-COR High reactivity; Ac₂O, (CF₃CO)₂O, succinic anhydride Carbamate R-O-CO-NR’R” Protecting group (Boc, Cbz, Fmoc, Alloc, Teoc); also as polymer (PU) Urea RHN-CO-NHR H-bond donor/acceptor; H-bond catalysis (Schreiner thiourea) Carbamic acid R-NH-COOH Unstable; decarbox to amine + CO₂ Carbonate ester R-O-CO-O-R DMC, DEC as green acylating Isocyanate R-N=C=O Step-growth PU; very moisture-sensitive Ketene R₂C=C=O Very reactive [2+2] cycloaddition (β-lactams) Nitrile (cyano) R-C≡N Hydrolysis → amide → acid; reduction → primary amine; addition with RMgX → ketone; Strecker amino acid synth Isonitrile (isocyanide) R-N⁺≡C⁻ Passerini, Ugi multi-component; toxic-smell
Nitrogen functional groups
Group Structure Reactivity Amine 1° RNH₂ Nucleophile/base (pKaH 10–11 sp³); reductive amination, acylation, sulfonylation, Hofmann elimination Amine 2° R₂NH Same; weaker nucleophile due to steric; forms enamines Amine 3° R₃N Base only; Menshutkin alkylation → quaternary salt Ammonium R₄N⁺ X⁻ Phase-transfer catalyst; Hofmann eliminative Aniline ArNH₂ Weaker base (pKaH ~4.6); easier oxidation; diazotization to ArN₂⁺ Imine R₂C=N-R Reduction (NaBH₃CN reductive amination); Mannich; Schiff base Enamine R₂C=CR-NR₂ Stork enamine alkylation/acylation Hydrazine RHN-NH₂, R₂N-NH₂ Wolff-Kishner reduction; pyrazole synth; Fischer indole; hydrazone formation Hydrazone R₂C=N-NHR Wolff-Kishner; Shapiro reaction; tosylhydrazones Oxime R₂C=N-OH Beckmann rearrangement (→ amide); reduction to amine Nitroso R-N=O Tautomer of oxime; coupling for nitrosamines (carcinogen) Nitro R-NO₂ Reduction → amine (Sn/HCl, Fe/HCl, H₂/Pd-C, Zn/AcOH, SnCl₂); Henry rxn (CH₂NO₂ acidic) Hydroxylamine R-NH-OH Oxime synth; oxidation intermediate Azide R-N₃ Click rxn (CuAAC, SPAAC); Staudinger reduction → amine + N₂; Curtius rearrangement; Schmidt rxn Diazonium Ar-N₂⁺ X⁻ Sandmeyer (→ Ar-X, Ar-CN, Ar-OH); coupling to azo dyes Diazo R₂C=N=N Carbene generation (thermal/photo); cyclopropanation Cyanate R-O-C≡N Isocyanate R-N=C=O PU Thiocyanate R-S-C≡N Isothiocyanate R-N=C=S Edman degradation N-terminus protein Guanidine R-NH-C(NH)-NHR Strong base (pKaH 13.6 for tetramethylguanidine; arginine side chain) Amidine R-N=C(R)-NHR DBU pKaH 24 (in MeCN); DBN pKaH 23 Sulfonamide R-SO₂-NHR NH acidic (pKa ~10); pharmacophore (sulfa drugs)
Sulfur functional groups
Group Structure Reactivity Thiol (mercaptan) R-SH pKa ~10; soft nucleophile (vs RO⁻ hard); disulfide formation (oxidation); thiol-ene click Thiolate R-S⁻ Strong soft nucleophile Sulfide (thioether) R-S-R Oxidation → sulfoxide → sulfone; SN2 leaving group sulfonium Disulfide R-S-S-R Protein structure (cysteine bridges); reduce TCEP/DTT/βME Sulfoxide R-S(=O)-R Chiral (S inversion barrier ~38 kcal/mol); DMSO solvent; reduction to sulfide Sulfone R-S(=O)₂-R Strong EWG; sulfonyl ylide; Julia olefination Sulfonic acid R-SO₃H Very strong acid (pKa ~−2 to 1) Sulfonate ester R-SO₃-R’ Mesylate (MsO−, leaving group); tosylate (TsO−); triflate (TfO−, super-LG); nosylate (NsO−) Sulfonamide R-SO₂-NR’₂ Drug pharmacophore Sulfonyl chloride R-SO₂-Cl MsCl, TsCl, TfCl for activation Sulfate R-O-SO₂-O-R’ Heparin/glycosamine groups Thiocarbonyl C=S R₂C=S Thione; Barton deoxygenation (xanthate) Xanthate R-O-C(=S)-S-R’ Barton-McCombie deoxygenation
Group Structure Reactivity Alkyl halide R-X RCH₂-X SN2/SN1/E1/E2; X = F<Cl<Br<I (leaving-group ability); R-F mostly inert Aryl halide Ar-X Ar-X SNAr only with EWG; metal-cat coupling (Suzuki, Negishi, Stille, Sonogashira, Buchwald-Hartwig amination, Heck) Vinyl halide CR=CR-X CR=CR-X sp² C-X, slower coupling than alkyl/aryl, but standard substrate Acyl halide R-CO-X RCOX Most reactive C=O Halonium R-X⁺ bridging Intermediate in HX addition Trihalomethyl CX₃ CCl₃, CF₃, CBr₃ CF₃ pharmacophore; Reformatsky; Ruppert reagent (Me₃SiCF₃) for trifluoromethyl
Group Structure Reactivity Phosphine R₃P sp³ P, lone pair Ligand for transition metals; nucleophile (Wittig, Mitsunobu, Appel) Phosphonium R₄P⁺ X⁻ sp³ P⁺ Wittig (after deprotonation to ylide) Phosphine oxide R₃P=O sp³ P⁺, O⁻ Wittig byproduct; HMPA, DMPU Phosphate (RO)₃P=O DNA backbone; ATP Phosphonate RP(=O)(OR)₂ HWE olefination (Horner-Wadsworth-Emmons) Phosphonium ylide R₃P⁺=CR₂⁻ Wittig C=C formation from R₂C=O + ylide → R₂C=CR₂ + R₃P=O Boronic acid R-B(OH)₂ sp² B (empty p) Suzuki coupling; reversible diol binding; Chan-Lam Boronic ester RB(OR’)₂ pinacol, neopentanediol, MIDA Suzuki bench-stable variants Borane BH₃, R₂BH sp² B; Lewis acid Hydroboration; reduction (carboxylic acid → alcohol) Catecholborane HBcat Hydroboration; bench-stable BH₃ alt 9-BBN dialkylborane Selective hydroboration Silyl R₃Si- TMS Me₃Si, TES Et₃Si, TBS tBuMe₂Si, TIPS (iPr)₃Si, TBDPS tBuPh₂Si Protecting group for OH (TBS most common); Brook rearr.; Sakurai allylation Silyl enol ether R₂C=C(OSiR’₃)R Mukaiyama aldol Stannane R₃Sn-R Bu₃SnR; bu3SnH Stille coupling; radical H-atom transfer (Bu₃SnH, AIBN) Cuprate R₂CuLi (Gilman) Conjugate addition; coupling; less Grignard-like reactivity Grignard RMgX Strong nucleophile/base; addition to C=O Organolithium RLi nBuLi, sBuLi, tBuLi, MeLi, PhLi Strong base/nucleophile; metalation (ortho-directed) Organozinc RZnX (Reformatsky), R₂Zn (Negishi) Negishi coupling; aldehyde addition; functional-group tolerant Organoaluminum AlR₃, AlMe₃, DIBAL-H (iBu₂AlH) Reduction (ester → aldehyde stop with DIBAL at −78); coupling
Part 2 — Acid Dissociation Constants pKa
All values in water (H₂O = 15.7) at 25 °C unless noted. pKa drops 1 unit ≈ 10× more acidic. Smaller pKa = stronger acid; conjugate base = weaker base.
Mineral and inorganic acids
Acid pKa Conj base HClO₄ perchloric −10 ClO₄⁻ HI hydroiodic −10 I⁻ HBr hydrobromic −9 Br⁻ HCl hydrochloric −7 Cl⁻ H₂SO₄ sulfuric (1st) −3 HSO₄⁻ HSO₄⁻ (2nd) 1.99 SO₄²⁻ HNO₃ nitric −1.4 NO₃⁻ HF hydrofluoric 3.17 F⁻ H₃PO₄ phosphoric (1st) 2.12 H₂PO₄⁻ H₂PO₄⁻ (2nd) 7.21 HPO₄²⁻ HPO₄²⁻ (3rd) 12.32 PO₄³⁻ H₂CO₃ carbonic (eff) 6.35 HCO₃⁻ HCO₃⁻ 10.33 CO₃²⁻ HCN hydrocyanic 9.21 CN⁻ HN₃ hydrazoic 4.72 N₃⁻ HSCN thiocyanic −1.84 SCN⁻ H₂S (1st) 7.0 HS⁻ HS⁻ (2nd) 12.9 S²⁻ HOCl hypochlorous 7.54 OCl⁻ H₃BO₃ boric 9.24 H₂BO₃⁻
Superacids and super-strong (Hammett H₀)
Acid H₀ H₂SO₄ pure −12 Magic acid FSO₃H·SbF₅ 1:1 −23 Fluoroantimonic HF·SbF₅ 1:1 −31.3 HF·BF₃ −19 TfOH (CF₃SO₃H) −14 FSO₃H fluorosulfonic −15 HClO₄ 70% −13
Sulfonic / sulfinic / phosphonic
Acid pKa TfOH triflic CF₃SO₃H −14 MsOH methanesulfonic CH₃SO₃H −1.9 TsOH p-toluenesulfonic −2.8 Benzenesulfonic −6.5 Camphorsulfonic CSA 1.2 Phenylphosphonic 1st 1.8 Methylphosphonic 1st 2.4
Carboxylic acids
Acid pKa HCOOH formic 3.75 CH₃COOH acetic 4.76 CH₃CH₂COOH propanoic 4.87 (CH₃)₃CCOOH pivalic 5.03 ClCH₂COOH chloroacetic 2.86 Cl₂CHCOOH dichloroacetic 1.29 Cl₃CCOOH trichloroacetic TCA 0.66 F₃CCOOH trifluoroacetic TFA 0.23 BrCH₂COOH 2.86 ICH₂COOH 3.18 NCCH₂COOH cyanoacetic 2.45 O₂NCH₂COOH 1.68 HOOC-COOH oxalic 1st 1.25 HOOC-COO⁻ (2nd) 4.14 Malonic 1st 2.83 Malonic 2nd 5.69 Succinic 1st 4.21 Succinic 2nd 5.64 Adipic 1st 4.41 Maleic (cis) 1st 1.83 Fumaric (trans) 1st 3.03 Lactic 3.86 Pyruvic 2.39 Citric 1st 3.13 Citric 2nd 4.76 Citric 3rd 6.40 Tartaric 1st 3.04 Ascorbic OH₁ 4.10 Ascorbic OH₂ 11.6 Benzoic 4.20 p-NO₂-benzoic 3.41 p-MeO-benzoic 4.47 Picric (2,4,6-trinitrophenol) 0.38 Acrylic 4.25 Methacrylic 4.66
Alcohols and water
Compound pKa H₂O 15.7 (or 14 if using [ H + ] [ O H − ] / [ H 2 O ] pure ) CH₃OH 15.5 C₂H₅OH 15.9 iPrOH 16.5 tBuOH 17 HOCH₂CH₂OH ethylene glycol 1st 14.8 Glycerol 14.4 TFE 2,2,2-trifluoroethanol 12.46 HFIP hexafluoroisopropanol 9.30 H₂O₂ 11.6 CH₃OOH 11.5
Phenols
Compound pKa PhOH phenol 9.98 p-MeO-PhOH (4-methoxyphenol) 10.20 p-Cl-PhOH 9.38 p-NO₂-PhOH (4-nitrophenol) 7.15 o-NO₂-PhOH (2-nitrophenol) 7.17 2,4-dinitrophenol 4.09 2,4,6-trinitrophenol (picric acid) 0.38 1-naphthol 9.34 2-naphthol 9.51 BHT (2,6-di-tBu-4-methylphenol) 12.2 Catechol 1st 9.45 Catechol 2nd 13.0 Hydroquinone 1st 9.85 Hydroquinone 2nd 11.4 Pyrogallol 1st 8.94 Pyrogallol 2nd 11.08 Pyrogallol 3rd 14 Vitamin E (α-tocopherol) 11.9
α-H to carbonyls / nitro / sulfonyl
Compound pKa Acetone CH₃COCH₃ 19.3 Acetaldehyde 17 Methyl acetate (α-H) 25 Ethyl acetate 25 DMF α-H 27.4 Acetamide 25 Acetonitrile CH₃CN 25 Nitromethane CH₃NO₂ 10.21 CH₂(NO₂)₂ 3.6 HC(NO₂)₃ 0.1 Acetylacetone (1,3-diketone) 8.95 Dimedone (5,5-dimethyl-1,3-cyclohexanedione) 5.23 Meldrum’s acid 4.97 Diethyl malonate 13.3 Ethyl cyanoacetate 9 Ethyl nitroacetate 5.8 Ethyl acetoacetate (β-ketoester) 10.7 Diethyl ethylmalonate 13 Diethyl phosphonate 13 Dimethyl sulfoxide DMSO 35 Dimethyl sulfone 31 Phenyl methyl sulfone PhSO₂CH₃ 29 Acetylacetonate (in DMSO) 13
Carbon acids (hydrocarbon)
Compound pKa Cyclopentadiene C₅H₆ 16 Indene 20 Fluorene 22.6 9-Phenylfluorene 18.5 Triphenylmethane Ph₃CH 30 Diphenylmethane Ph₂CH₂ 32 Toluene PhCH₃ 43 Benzene 43 Propene CH₂=CHCH₃ allyl 43 Ethylene CH₂=CH₂ 44 Methane CH₄ 48 Ethane 50 Cyclopropane CH 46 Cyclobutane 51 Cyclohexane 49 H₂C=O (formaldehyde) 17 (α-H to ene gem) HC≡CH acetylene 25 RC≡CH terminal alkyne 25 Pyrrole NH 17 Indole NH 17 Imidazole NH 14.4 Benzimidazole NH 12.8 Tetrazole NH 4.9 Triazole NH 9.3 Saccharin NH 1.6 Sulfonamide RSO₂NH₂ 10–11 Hydantoin NH 9.0 Barbituric acid NH 4.0 Phthalimide NH 8.3
Amines, amino acids, heterocycles (pKaH of conjugate acid)
Compound pKaH NH₃ ammonia 9.25 (pKb = 4.75) CH₃NH₂ methylamine 10.62 (CH₃)₂NH dimethylamine 10.64 (CH₃)₃N trimethylamine 9.76 C₂H₅NH₂ ethylamine 10.65 (C₂H₅)₃N triethylamine 10.65 iPr₂NH diisopropylamine 11.1 iPr₂NEt Hünig’s base (DIPEA) 10.5 Pyrrolidine 11.31 Piperidine 11.22 Morpholine 8.36 DABCO (1,4-diazabicyclo[2.2.2]octane) 8.7 DBU (1,8-diazabicyclo[5.4.0]undec-7-ene) 24.3 (in MeCN); 11.5 (in H₂O) DBN (1,5-diazabicyclo[4.3.0]non-5-ene) 23.7 (MeCN); 13.5 (H₂O) TMG (1,1,3,3-tetramethylguanidine) 13.6 DMAP (4-dimethylaminopyridine) 9.7 Pyridine 5.25 2-Methylpyridine (α-picoline) 5.94 4-Methylpyridine 6.05 2,6-Lutidine (2,6-dimethylpyridine) 6.65 2,6-Di-tert-butylpyridine 4.95 (steric hindrance lowers despite alkyl) Quinoline 4.85 Isoquinoline 5.42 Imidazole NH-bound base 6.95 Pyridazine 2.3 Pyrimidine 1.3 Pyrazine 0.6 Aniline PhNH₂ 4.6 p-NO₂-aniline 1.0 p-MeO-aniline 5.3 Diphenylamine Ph₂NH 0.8 Hydrazine H₂N-NH₂ 8.1 Hydroxylamine NH₂OH 5.96 Guanidine (free base, very strong) 13.6 Histidine imidazole side chain 6.04 Lysine ε-NH₂ 10.54 Arginine guanidinium 12.48 Aspartic acid β-COOH 3.65 Glutamic acid γ-COOH 4.25 Cysteine SH 8.3 Tyrosine OH 10.07 Glycine α-COOH 2.35 Glycine α-NH₃⁺ 9.78
Common bases (pKaH of conjugate acid)
Base pKaH OH⁻ 15.7 (H₂O) NaOMe 15.5 (MeOH) NaOEt 15.9 (EtOH) KOtBu 17 (tBuOH) NaH 36–42 (H₂) KH 36–42 (H₂) LiAlH₄ huge (effectively) LDA (LiN(iPr)₂) 36 (HN(iPr)₂) LiHMDS / NaHMDS / KHMDS (M-N(TMS)₂) 26 (HN(TMS)₂) LiTMP (LiN(C₅H₁₀)) 37 (HTMP) nBuLi ~50 (butane) sBuLi ~51 tBuLi ~53 MeLi ~48 PhLi ~43 P₂-tBu (Schwesinger phosphazene) 33 (MeCN), much higher in H₂O P₄-tBu (Schwesinger) 42 (MeCN) Verkade’s superbase 32
S, Se, P, Si
Compound pKa H₂S 7.0 CH₃SH (methanethiol) 10.33 PhSH (thiophenol) 6.62 EtSH 10.61 HSO₃⁻ 7.2 H₂Se 3.89 PH₃ phosphine 27 Ph₃P-H⁺ phosphonium 2.7 (Ph₃P pKaH) (C₆H₅)₃SiH 36 (CH₃)₃SiH TMS-H 35 Me₃SiCH₃ TMS-CH₃ 35
Part 3 — Solvent Properties Table
Big table — ~35 common laboratory solvents with the dozen properties chemists trade off (bp, mp, dielectric, polarity, dipole, Hildebrand δ, log P, density, miscibility, toxicity / regulatory status).
Legend
bp: normal boiling point at 1 atm (°C).
mp: melting point (°C).
ε: dielectric constant (relative permittivity) at 20–25 °C.
ET(30) / ET(N): Reichardt’s polarity scale (kcal/mol; higher = more polar). Water = 63.1.
μ: gas-phase dipole moment (Debye).
δ: Hildebrand solubility parameter (cal/cm³)^½ ≈ (J/cm³)^½/2.045.
log P: octanol-water partition coefficient.
ρ: density (g/mL @ 20 °C).
H₂O misc: solubility in water (∞ = fully miscible; or g/100 mL).
Tox / reg: brief toxicity + regulatory flag.
Protic polar
Solvent bp °C mp °C ε ET(30) μ (D) δ log P ρ H₂O misc Tox / reg Water 100.0 0.0 78.5 63.1 1.85 23.4 −1.38 1.000 ∞ None Methanol (MeOH) 64.7 −97.6 32.6 55.4 1.70 14.5 −0.74 0.791 ∞ Mod. CNS tox; optic nerve damage; flammable Ethanol (EtOH) 78.4 −114.5 24.5 51.9 1.69 12.7 −0.31 0.789 ∞ Low tox; flammable 1-Propanol (nPrOH) 97.2 −126 20.1 50.7 1.68 12.0 0.25 0.803 ∞ Low 2-Propanol (iPrOH) 82.4 −89 19.9 48.4 1.66 11.5 0.05 0.786 ∞ Low 1-Butanol (nBuOH) 117.7 −89.5 17.8 50.2 1.66 11.4 0.88 0.810 7.7 g/100 mL Low-mod tert-Butanol (tBuOH) 82.4 25.5 12.5 43.9 1.66 10.9 0.40 0.781 ∞ Low (solid in cold rooms) Ethylene glycol 197.3 −12.9 37.7 56.3 2.28 16.5 −1.36 1.113 ∞ Tox (oxalate); ingestion deadly Glycerol 290 17.8 42.5 57.0 2.56 17.8 −1.76 1.261 ∞ Low Acetic acid (AcOH) 117.9 16.6 6.2 51.7 1.74 10.1 −0.17 1.049 ∞ Corrosive; flammable TFE 2,2,2-trifluoroethanol 74.0 −43.5 26.5 59.8 2.03 11.7 0.41 1.382 ∞ Mod; expensive HFIP 1,1,1,3,3,3-hexafluoroisopropanol 58.2 −3.3 16.7 65.3 2.05 12.4 1.07 1.596 ∞ Low; expensive (~$200/kg); stabilizes cations Formic acid 100.8 8.3 58.5 57.7 1.41 12.1 −0.54 1.220 ∞ Corrosive; reducing Aniline 184.4 −6.0 6.89 44.3 1.51 11.5 0.90 1.022 3.6 g/100 mL Tox (methemoglobinemia); IARC 2A
Aprotic polar (high ε, no O-H)
Solvent bp °C mp °C ε ET(30) μ (D) δ log P ρ H₂O misc Tox / reg Acetone 56.1 −94.7 20.7 42.2 2.88 9.9 −0.24 0.791 ∞ Low; very flammable 2-Butanone (MEK) 79.6 −86 18.5 41.3 2.78 9.3 0.29 0.805 27.5 g/100 mL Mod; flammable Acetonitrile (MeCN) 81.6 −45.7 36.6 45.6 3.92 11.9 −0.34 0.786 ∞ Mod tox (forms HCN slowly); HPLC standard DMSO (dimethyl sulfoxide) 189 18.5 46.7 45.1 3.96 12.0 −1.35 1.100 ∞ Low (but penetrates skin, carrying solutes) DMF (N,N-dimethylformamide) 153 −60.4 36.7 43.8 3.86 12.1 −1.01 0.944 ∞ Reprotox (Cat 1B EU REACH SVHC); restricted DMAc (N,N-dimethylacetamide) 165 −20 37.8 42.9 3.72 11.1 −0.77 0.937 ∞ Reprotox SVHC NMP (N-methyl-2-pyrrolidone) 202 −24 32.2 42.2 4.09 11.2 −0.46 1.028 ∞ Reprotox Cat 1B SVHC; EU REACH restricted (Annex XVII); phasing out DMPU (1,3-dimethyl-3,4,5,6-tetrahydro-2(1H)-pyrimidinone) 246 −23 36.1 42 4.23 10.5 0.5 1.064 ∞ Low; HMPA replacement HMPA (hexamethylphosphoramide) 233 7.2 30 40.9 5.54 9.1 0.28 1.030 ∞ IARC 2B (animal carcinogen); replaced by DMPU Sulfolane (tetramethylene sulfone) 287 28.5 43.3 44.0 4.81 13.3 −0.77 1.261 ∞ Low; used in BTX extraction Propylene carbonate 240 −48.8 64.9 46.6 4.94 13.3 −0.41 1.205 ∞ Low; Li-ion battery electrolyte Pyridine 115.2 −41.6 12.4 40.5 2.20 10.7 0.65 0.982 ∞ Low-mod; pungent odor Nitromethane (MeNO₂) 101.2 −28.5 35.9 46.3 3.46 12.6 −0.35 1.137 11 g/100 mL Explosive sensitizer Nitrobenzene 210.8 5.7 34.8 41.2 4.22 11.1 1.85 1.204 0.19 g/100 mL Tox (methemoglobinemia)
Aprotic moderately polar (ethers, esters)
Solvent bp °C mp °C ε ET(30) μ (D) δ log P ρ H₂O misc Tox / reg Ethyl acetate (EtOAc, EA) 77.1 −83.6 6.0 38.1 1.78 9.1 0.73 0.902 8.7 g/100 mL Low; very flammable Methyl acetate (MeOAc) 56.9 −98 6.7 40.0 1.72 9.6 0.18 0.932 24.4 g/100 mL Low iPropyl acetate (iPrOAc) 88.6 −73 6.3 36.5 1.78 8.7 1.18 0.872 4.3 g/100 mL Low; green replacement for EtOAc n-Butyl acetate (BuOAc) 126.1 −78 5.1 35.8 1.84 8.5 1.78 0.882 0.8 g/100 mL Low; mod flammable Tetrahydrofuran (THF) 66.0 −108.4 7.6 37.4 1.75 9.5 0.46 0.889 ∞ Low; peroxide hazard when aged; BHT-stabilized 2-MeTHF (2-methyltetrahydrofuran) 80.2 −136 6.9 36 1.6 9.0 1.0 0.854 14 g/100 mL Low; bio-based; greener THF replacement (Pennakem) 1,4-Dioxane 101.3 11.8 2.2 36.0 0.45 10.0 −0.27 1.034 ∞ IARC 2B suspected carcinogen; peroxide hazard MTBE (methyl tert-butyl ether) 55.2 −109 4.5 34.7 1.4 7.6 0.94 0.741 4.8 g/100 mL Low; flammable; ground-water contaminant historic DME (1,2-dimethoxyethane, glyme) 84.5 −58 7.2 38.2 1.71 8.6 −0.21 0.869 ∞ Peroxide hazard; SVHC reprotox Diglyme (diethylene glycol DME) 162 −64 7.4 38.6 1.97 8.6 −0.36 0.943 ∞ Peroxide; SVHC reprotox Diisopropyl ether (DIPE) 68.5 −85.5 3.9 34.0 1.13 7.0 1.52 0.726 0.94 g/100 mL Severe peroxide hazard; minimize use Diethyl ether (Et₂O) 34.6 −116.3 4.27 34.5 1.15 7.4 0.83 0.713 6.9 g/100 mL Peroxide hazard; very flammable; vapor heavy CPME (cyclopentyl methyl ether) 106 −140 4.76 36.5 1.27 8.4 1.59 0.860 1.1 g/100 mL Low; low peroxide formation; Zeon “Solva CPME” green solvent Cyrene (dihydrolevoglucosenone) 227 −18 37.3 49.5 6.7 13.0 −1.1 1.250 ∞ Low; bio-based; green NMP/DMF replacement γ-Valerolactone (GVL) 207 −31 36.5 42.5 4.27 11.5 0.10 1.046 ∞ Low; bio-based Anisole (methoxybenzene) 154 −37 4.3 37.1 1.38 9.5 2.11 0.995 0.1 g/100 mL Low; green replacement for chlorobenzene
Aprotic nonpolar (hydrocarbons, halogenated)
Solvent bp °C mp °C ε ET(30) μ (D) δ log P ρ H₂O misc Tox / reg Pentane (n-) 36.1 −130 1.84 31.0 0 7.0 3.39 0.626 negligible Low; extremely flammable Hexane (n-) 68.7 −95 1.89 31.0 0.085 7.3 3.90 0.659 negligible n-hexane → 2,5-hexanedione metabolite → peripheral neuropathy; replaced by heptane Heptane (n-) 98.4 −90.6 1.92 30.9 0 7.4 4.66 0.684 negligible Low; greener than hexane Cyclohexane 80.7 6.5 2.02 30.9 0 8.2 3.44 0.778 negligible Low; flammable Methylcyclohexane 100.9 −126.6 2.02 31.4 0 7.8 3.61 0.770 negligible Low Petroleum ether (60–80) 60–80 low 1.9 31 ~0 7.4 high 0.65 negligible Low Toluene 110.6 −95 2.4 33.9 0.36 8.9 2.73 0.867 0.05 g/100 mL Mod tox (CNS); benzene replacement; flammable Benzene 80.1 5.5 2.27 34.3 0 9.2 2.13 0.876 0.18 g/100 mL IARC 1 known carcinogen; deprecated (use toluene) Xylenes (o-, m-, p-) 138–145 varies 2.3–2.4 ~34 0.45 8.8 3.15 0.860–0.881 negligible Mod Mesitylene (1,3,5-trimethylbenzene) 164.7 −44.7 2.28 32.7 0 8.8 3.42 0.864 negligible Mod Chlorobenzene 131.7 −45 5.7 36.8 1.69 9.5 2.84 1.107 0.05 g/100 mL Tox; replaced by anisole or toluene 1,2-Dichlorobenzene (o-DCB) 180.5 −17 9.9 38 2.50 10.0 3.43 1.306 0.014 g/100 mL Tox; PAH solvent DCM (dichloromethane, CH₂Cl₂, MeCl₂) 39.6 −97 8.9 41.1 1.6 9.7 1.25 1.326 1.3 g/100 mL IARC 2A; OSHA PEL 25 ppm (recently 2 ppm 2024); banned EU paint strippers 2021 CHCl₃ (chloroform) 61.2 −63.5 4.8 39.1 1.04 9.2 1.97 1.483 0.8 g/100 mL IARC 2B + cardiac arrhythmia; mostly NMR solvent only CCl₄ (carbon tetrachloride) 76.7 −22.9 2.24 32.4 0 8.6 2.83 1.594 0.08 g/100 mL IARC 2B + ozone-depleting (Montreal Protocol 1989 banned production for emissive uses) 1,2-DCE (1,2-dichloroethane) 83.5 −35.4 10.4 41.3 1.83 9.8 1.48 1.253 0.87 g/100 mL IARC 2B; OSHA PEL 1 ppm 1,1,1-TCE (1,1,1-trichloroethane) 74.1 −33 7.5 36 1.79 8.6 2.49 1.336 0.13 g/100 mL Ozone-depleting; phased out 1996 Montreal Protocol Trichloroethylene (TCE) 87.2 −86 3.4 35.9 0.80 9.3 2.42 1.464 0.13 g/100 mL IARC 1 carcinogen; restricted use Perchloroethylene (PCE, tetrachloroethylene) 121.3 −22 2.3 31.9 0 9.3 3.40 1.622 0.015 g/100 mL IARC 2A (likely carcinogen); dry-cleaning, phasing out CS₂ (carbon disulfide) 46.2 −111.6 2.6 32.6 0 10.0 1.94 1.263 0.22 g/100 mL Very tox (CNS, cardiovascular); extremely flammable
Solvent selection principles
Like-dissolves-like : polar solutes dissolve in polar solvents. Quantify by:
Hildebrand solubility parameter (δ) : total cohesive energy density. Solute-solvent miscible if |Δδ| ≤ 2–3 (cal/cm³)^½ rule of thumb.
Hansen solubility parameters (HSP) : 3D extension splitting δ into δD (dispersion), δP (polar), δH (H-bonding). Hansen sphere of radius R₀; if Ra² = 4(Δδ_D)² + (Δδ_P)² + (Δδ_H)² < R₀², miscible. Commercial software: HSPiP (Charles Hansen, Steven Abbott).
Snyder solvent triangle : polarity index P’ + selectivity x_e (electron donor), x_d (electron acceptor), x_n (dipole). Used in HPLC mobile-phase optimization.
Cosolvents : mix two miscible solvents with different δ to bridge a gap (e.g., MeOH/CH₂Cl₂ for moderately polar substrates).
Green solvent guides
Industry guides (consult before scaling):
GSK Solvent Sustainability Guide (Henderson et al., 2011, Green Chem.) — 110 solvents ranked on waste, health, safety, environment.
Pfizer “Reagent Guide for Process Chemistry” — color-coded preferred / usable / undesirable.
Sanofi solvent selection guide (Prat et al., 2013, Org. Process Res. Dev.).
AstraZeneca + Pfizer + Merck collaborative ACS GCI Pharmaceutical Roundtable.
CHEM21 selection guide (Prat et al., 2016, Green Chem.) — pan-European multi-company consensus.
ACS GCI Green Chemistry Institute Pharmaceutical Roundtable Solvent Selection Guide.
Solvent-replacement summary
Avoid Use instead Why DMF, NMP, DMAc 2-MeTHF, EtOAc, CPME, Cyrene, GVL Reprotox / SVHC EU REACH restrictions HMPA DMPU IARC 2B carcinogen Benzene Toluene IARC 1 carcinogen DCM EtOAc, 2-MeTHF, CPME OSHA PEL crash 2024 CHCl₃ DCM (still), EtOAc, MeCN Cardiac sensitization CCl₄ Heptane / cyclohexane Ozone-depleting; deprecated n-Hexane Heptane Peripheral neuropathy 1,4-Dioxane 2-MeTHF, MTBE, CPME IARC 2B Et₂O MTBE, CPME Peroxide hazard, low fp Pyridine DMAP catalysis in alt solvent Smell, mod tox
Bio-based / next-generation solvents
Solvent Source Status 2-MeTHF Furfural (bagasse) → catalytic H₂ Commercial (Pennakem, Penn A Kem) Cyrene (dihydrolevoglucosenone) Cellulose pyrolysis Commercial (Circa Group, Mibelle Biochemistry; under Solvay license) GVL (γ-valerolactone) Levulinic acid (biomass) Pilot (GFBiochemicals; Aalto Univ.) Ethyl lactate Fermentation of carbohydrates Vertec Biosolvents Limonene Citrus peel Florida Chemical, low cost; replaces aromatic p-Cymene Pine oil Eucalyptol (1,8-cineole) Eucalyptus Ionic liquids [BMIM][BF₄], [EMIM][OTf], DESs (choline-urea, etc.)Niche; high cost, recycling required Supercritical CO₂ (scCO₂) Compressed Decaffeination, polymer foaming, chromatography (SFC) Deep eutectic solvents (DES) Choline chloride + urea/glycerol/sugars Cheap, biodegradable; niche use
Adjacent
reagent-and-reaction-catalog — Reagents that act on these functional groups; named reactions.
spectroscopy-reference-tables — IR/NMR signatures for each functional group.
catalyst-instrumentation-and-monomers — Catalysts that transform these functional groups; monomers built from them.
organic-chemistry — Higher-level overview of mechanism + functional-group interconversion.
analytical-chemistry — Acid-base titration, pH-dependent extraction.
physical-chemistry — Thermodynamics of solution (Hildebrand model, regular solution).
biochemistry — Amino-acid pKa table (His 6.0, Lys 10.5, Arg 12.5, Asp 3.7, Glu 4.3, Cys 8.3, Tyr 10.1) underlies enzyme catalysis.
model-organisms-and-sequencing-tech — Cellular pH regulation, buffer systems.
materials-properties — Polymer-solvent compatibility, Hansen parameters in materials.